Trait Data and Analysis for

RGM domain family, member A

Details and Links

Group Mouse: CIE-RMA group
Tissue Midbrain mRNA
Gene Symbol Rgma
Aliases Wikidata: RGM; BC059072; C230063O06
GeneNetwork: BC059072; C230063O06
Location Chr 7 @ 73.417317 Mb on the plus strand
Database NIA-UTHSC Midbrain CIE Affy MTA 1.0 Exon Level (Apr17) RMA
Resource Links Gene    GeneMANIA    Protein Atlas    Rat Genome DB    GTEx Portal   
UCSC    BioGPS    STRING    PANTHER    Gemma    ABA    EBI GWAS   


More about Normal Probability Plots and more about interpreting these plots from the glossary

Transform and Filter Data

Edit or delete values in the Trait Data boxes, and use the Reset option as needed.

Outliers highlighted in orange can be hidden using the Hide Outliers button.

Samples with no value (x) can be hidden by clickingHide No Value button.

Calculate Correlations

Chr:     Mb:  to 
The Sample Correlation is computed between trait data and any other traits in the sample database selected above. Use Spearman Rank when the sample size is small (<20) or when there are influential outliers.

Mapping Tools

Mapping options are disabled for data not matched with genotypes.

Review and Edit Data

Show/Hide Columns:

  # read into R
  trait <- read.csv("", header = TRUE, comment.char = "#")

  # read into python
  import pandas as pd
  trait = pd.read_csv("", header = 0, comment = "#")