Trait Data and Analysis for ILM2450711

RGM domain family, member A; distal 3' UTR (SNP free region)

Details and Links

Group Mouse: HS group
Tissue Lung mRNA
Gene Symbol Rgma
Aliases Wikidata: RGM; BC059072; C230063O06
GeneNetwork: BC059072; C230063O06; MGC38550; MGC69915; RGM
Location Chr 7 @ 73.419722 Mb on the plus strand
Database OX UK HS ILM6v1.1 Lung (May 2010) RankInv
Target Score BLAT Specificity : 5.000    Score: 50.000
Resource Links Gene    OMIM    GeneMANIA    Protein Atlas    Rat Genome DB    GTEx Portal   
UCSC    BioGPS    STRING    PANTHER    Gemma    ABA    EBI GWAS   


More about Normal Probability Plots and more about interpreting these plots from the glossary

Transform and Filter Data

Edit or delete values in the Trait Data boxes, and use the Reset option as needed.

Outliers highlighted in orange can be hidden using the Hide Outliers button.

Samples with no value (x) can be hidden by clickingHide No Value button.

Calculate Correlations

Chr:     Mb:  to 
The Sample Correlation is computed between trait data and any other traits in the sample database selected above. Use Spearman Rank when the sample size is small (<20) or when there are influential outliers.

Mapping Tools

Mapping options are disabled for data not matched with genotypes.

Review and Edit Data

  # read into R
  trait <- read.csv("ILM2450711.csv", header = TRUE, comment.char = "#")

  # read into python
  import pandas as pd
  trait = pd.read_csv("ILM2450711.csv", header = 0, comment = "#")